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  5. LOC_Os07g27810.1

LOC_Os07g27810.1


Description : no hits & (original description: none)


Gene families : OG0001140 (Archaeplastida) Phylogenetic Tree(s): OG0001140_tree ,
OG_05_0000697 (LandPlants) Phylogenetic Tree(s): OG_05_0000697_tree ,
OG_06_0000889 (SeedPlants) Phylogenetic Tree(s): OG_06_0000889_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g27810.1
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00069130 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT1G52910 No alias Protein of unknown function (DUF1218) 0.03 Archaeplastida
AT1G68220 No alias Protein of unknown function (DUF1218) 0.04 Archaeplastida
AT4G27435 No alias Protein of unknown function (DUF1218) 0.14 Archaeplastida
GSVIVT01014391001 No alias No description available 0.08 Archaeplastida
Gb_10694 No alias no hits & (original description: none) 0.07 Archaeplastida
Gb_21515 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_40822 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os08g16130.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10429894g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_7840980g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c11_3330V3.1 No alias Protein of unknown function (DUF1218) 0.03 Archaeplastida
Pp3c13_21880V3.1 No alias Protein of unknown function (DUF1218) 0.02 Archaeplastida
Pp3c26_8150V3.1 No alias Protein of unknown function (DUF1218) 0.03 Archaeplastida
Pp3c4_8670V3.1 No alias Protein of unknown function (DUF1218) 0.02 Archaeplastida
Solyc05g009330.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc12g013650.2.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e009524_P001 No alias no hits & (original description: none) 0.16 Archaeplastida
Zm00001e031046_P002 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e033443_P001 No alias no hits & (original description: none) 0.16 Archaeplastida
Zm00001e039835_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006621 protein retention in ER lumen IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008373 sialyltransferase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR009606 DUF1218 58 153
No external refs found!