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  5. LOC_Os07g28610.1

LOC_Os07g28610.1


Description : Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana (sp|q8lca1|cut1b_arath : 98.2)


Gene families : OG0000711 (Archaeplastida) Phylogenetic Tree(s): OG0000711_tree ,
OG_05_0002739 (LandPlants) Phylogenetic Tree(s): OG_05_0002739_tree ,
OG_06_0003149 (SeedPlants) Phylogenetic Tree(s): OG_06_0003149_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g28610.1
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272260 evm_27.TU.AmTr_v1... Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.12 Archaeplastida
AMTR_s00038p00072170 evm_27.TU.AmTr_v1... Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.04 Archaeplastida
AT1G52220 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.16 Archaeplastida
AT2G46820 PTAC8, TMP14, PSI-P, PSAP photosystem I P subunit 0.13 Archaeplastida
AT4G01150 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.15 Archaeplastida
Cpa|evm.model.tig00000849.28 No alias No description available 0.01 Archaeplastida
Cpa|evm.model.tig00000900.28 No alias No description available 0.02 Archaeplastida
GSVIVT01003604001 No alias Protein CURVATURE THYLAKOID 1D, chloroplastic... 0.02 Archaeplastida
GSVIVT01017074001 No alias Protein CURVATURE THYLAKOID 1C, chloroplastic... 0.02 Archaeplastida
GSVIVT01027036001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.11 Archaeplastida
GSVIVT01027447001 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.12 Archaeplastida
GSVIVT01028749001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.11 Archaeplastida
Gb_09245 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.11 Archaeplastida
MA_60075g0010 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.06 Archaeplastida
MA_734271g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
MA_904218g0010 No alias no hits & (original description: none) 0.16 Archaeplastida
Mp1g25670.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.17 Archaeplastida
Mp6g20800.1 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.19 Archaeplastida
Mp6g20860.1 No alias Protein CURVATURE THYLAKOID 1C, chloroplastic... 0.16 Archaeplastida
Pp3c16_11960V3.1 No alias No annotation 0.06 Archaeplastida
Pp3c17_14680V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c17_14681V3.1 No alias No annotation 0.07 Archaeplastida
Pp3c20_4990V3.1 No alias No annotation 0.24 Archaeplastida
Pp3c23_20770V3.1 No alias No annotation 0.11 Archaeplastida
Pp3c8_17810V3.1 No alias No annotation 0.04 Archaeplastida
Smo49217 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.06 Archaeplastida
Solyc01g095430.3.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.17 Archaeplastida
Solyc06g066620.4.1 No alias Protein CURVATURE THYLAKOID 1C, chloroplastic... 0.11 Archaeplastida
Solyc10g005050.3.1 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.14 Archaeplastida
Solyc10g011770.4.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.14 Archaeplastida
Zm00001e000193_P001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.21 Archaeplastida
Zm00001e002212_P002 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.12 Archaeplastida
Zm00001e015912_P002 No alias Protein CURVATURE THYLAKOID 1D, chloroplastic... 0.02 Archaeplastida
Zm00001e023473_P001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.19 Archaeplastida
Zm00001e023828_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e029009_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e030948_P002 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.19 Archaeplastida
Zm00001e034870_P002 No alias no hits & (original description: none) 0.15 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009512 cytochrome b6f complex IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0009767 photosynthetic electron transport chain IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010109 regulation of photosynthesis IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
MF GO:0010242 oxygen evolving activity IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015995 chlorophyll biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0042548 regulation of photosynthesis, light reaction IEP Neighborhood
BP GO:0042549 photosystem II stabilization IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR025564 CAAD_dom 66 148
No external refs found!