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Description : pre-60S ribosomal subunit assembly factor (NSA1)
Gene families : OG0007135 (Archaeplastida) Phylogenetic Tree(s): OG0007135_tree ,
OG_05_0008025 (LandPlants) Phylogenetic Tree(s): OG_05_0008025_tree ,
OG_06_0007560 (SeedPlants) Phylogenetic Tree(s): OG_06_0007560_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os07g32350.1 | |
| Cluster | HCCA: Cluster_318 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00156p00062990 | evm_27.TU.AmTr_v1... | No description available | 0.02 | Archaeplastida | |
| AT1G29320 | No alias | Transducin/WD40 repeat-like superfamily protein | 0.03 | Archaeplastida | |
| Cpa|evm.model.tig00020710.40 | No alias | No description available | 0.03 | Archaeplastida | |
| Cre17.g718650 | No alias | No description available | 0.04 | Archaeplastida | |
| MA_60620g0010 | No alias | pre-60S ribosomal subunit assembly factor (NSA1) | 0.04 | Archaeplastida | |
| Smo418494 | No alias | No description available | 0.02 | Archaeplastida | |
| Solyc08g008160.4.1 | No alias | pre-60S ribosomal subunit assembly factor (NSA1) | 0.02 | Archaeplastida | |
| Zm00001e010447_P001 | No alias | pre-60S ribosomal subunit assembly factor (NSA1) | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Neighborhood |
| BP | GO:0000469 | cleavage involved in rRNA processing | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| MF | GO:0003746 | translation elongation factor activity | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
| BP | GO:0006412 | translation | IEP | Neighborhood |
| BP | GO:0006414 | translational elongation | IEP | Neighborhood |
| BP | GO:0006457 | protein folding | IEP | Neighborhood |
| BP | GO:0006518 | peptide metabolic process | IEP | Neighborhood |
| BP | GO:0006743 | ubiquinone metabolic process | IEP | Neighborhood |
| BP | GO:0006744 | ubiquinone biosynthetic process | IEP | Neighborhood |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Neighborhood |
| BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
| CC | GO:0016272 | prefoldin complex | IEP | Neighborhood |
| MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
| BP | GO:0030490 | maturation of SSU-rRNA | IEP | Neighborhood |
| MF | GO:0030515 | snoRNA binding | IEP | Neighborhood |
| CC | GO:0030684 | preribosome | IEP | Neighborhood |
| CC | GO:0032040 | small-subunit processome | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0042180 | cellular ketone metabolic process | IEP | Neighborhood |
| BP | GO:0042181 | ketone biosynthetic process | IEP | Neighborhood |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Neighborhood |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Neighborhood |
| BP | GO:0043604 | amide biosynthetic process | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
| MF | GO:0051082 | unfolded protein binding | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| BP | GO:0090305 | nucleic acid phosphodiester bond hydrolysis | IEP | Neighborhood |
| BP | GO:0090501 | RNA phosphodiester bond hydrolysis | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
| BP | GO:1901661 | quinone metabolic process | IEP | Neighborhood |
| BP | GO:1901663 | quinone biosynthetic process | IEP | Neighborhood |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |