LOC_Os07g32550.1


Description : rRNA adenosine dimethylase (DIM1B)


Gene families : OG0002205 (Archaeplastida) Phylogenetic Tree(s): OG0002205_tree ,
OG_05_0002471 (LandPlants) Phylogenetic Tree(s): OG_05_0002471_tree ,
OG_06_0006350 (SeedPlants) Phylogenetic Tree(s): OG_06_0006350_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g32550.1
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00244930 evm_27.TU.AmTr_v1... RNA processing.RNA modification.rRNA/tRNA... 0.03 Archaeplastida
GSVIVT01018854001 No alias RNA processing.RNA modification.rRNA/tRNA... 0.04 Archaeplastida
Smo116036 No alias RNA processing.RNA modification.rRNA/tRNA... 0.05 Archaeplastida
Solyc02g084730.3.1 No alias rRNA adenosine dimethylase (DIM1B) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Neighborhood
CC GO:0005666 RNA polymerase III complex IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006383 transcription by RNA polymerase III IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
CC GO:0030880 RNA polymerase complex IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001737 KsgA/Erm 36 252
No external refs found!