1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G30930

AT1G30930


Description : F-box family protein


Gene families : OG0000466 (Archaeplastida) Phylogenetic Tree(s): OG0000466_tree ,
OG_05_0000239 (LandPlants) Phylogenetic Tree(s): OG_05_0000239_tree ,
OG_06_0000111 (SeedPlants) Phylogenetic Tree(s): OG_06_0000111_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G30930
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AT1G26515 No alias F-box and associated interaction domains-containing protein 0.13 Archaeplastida
AT1G30780 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT1G30790 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT1G30925 No alias phospholipase Cs 0.09 Archaeplastida
AT1G31163 No alias F-box associated ubiquitination effector family protein 0.05 Archaeplastida
AT1G31620 No alias unknown protein; Has 9 Blast hits to 9 proteins in 2... 0.05 Archaeplastida
AT1G32660 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT1G33010 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT1G43005 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.06 Archaeplastida
AT1G46840 No alias F-box family protein 0.07 Archaeplastida
AT1G50880 No alias F-box and associated interaction domains-containing protein 0.09 Archaeplastida
AT1G53360 No alias F-box associated ubiquitination effector family protein 0.05 Archaeplastida
AT1G53370 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT1G60370 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT1G67130 No alias F-box family protein 0.06 Archaeplastida
AT2G16220 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT2G16450 No alias F-box and associated interaction domains-containing protein 0.12 Archaeplastida
AT2G23160 No alias F-box family protein 0.06 Archaeplastida
AT2G31470 DOR F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT2G32470 No alias F-box associated ubiquitination effector family protein 0.06 Archaeplastida
AT3G04660 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT3G52320 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT3G61340 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT4G19930 No alias F-box and associated interaction domains-containing protein 0.09 Archaeplastida
AT4G19940 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT5G42430 No alias F-box and associated interaction domains-containing protein 0.1 Archaeplastida
AT5G44345 No alias F-box associated ubiquitination effector family protein 0.07 Archaeplastida
AT5G50220 No alias F-box family protein 0.06 Archaeplastida
AT5G52610 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT5G52620 No alias F-box associated ubiquitination effector family protein 0.09 Archaeplastida
AT5G62660 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT5G65850 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000311 plastid large ribosomal subunit IEP Neighborhood
CC GO:0000315 organellar large ribosomal subunit IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005484 SNAP receptor activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0008320 protein transmembrane transporter activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0022884 macromolecule transmembrane transporter activity IEP Neighborhood
MF GO:0042887 amide transmembrane transporter activity IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:1904680 peptide transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR013187 F-box-assoc_dom_typ3 204 320
IPR001810 F-box_dom 4 41
No external refs found!