LOC_Os07g38130.1


Description : pathogen polygalacturonase inhibitor (PGIP)


Gene families : OG0004064 (Archaeplastida) Phylogenetic Tree(s): OG0004064_tree ,
OG_05_0002955 (LandPlants) Phylogenetic Tree(s): OG_05_0002955_tree ,
OG_06_0001891 (SeedPlants) Phylogenetic Tree(s): OG_06_0001891_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g38130.1
Cluster HCCA: Cluster_311

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00219620 evm_27.TU.AmTr_v1... Polygalacturonase inhibitor 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT5G06870 PGIP2, ATPGIP2 polygalacturonase inhibiting protein 2 0.03 Archaeplastida
LOC_Os03g32180.1 No alias Polygalacturonase inhibitor OS=Pyrus communis... 0.03 Archaeplastida
LOC_Os05g01380.1 No alias pathogen polygalacturonase inhibitor (PGIP) 0.03 Archaeplastida
LOC_Os05g01444.1 No alias pathogen polygalacturonase inhibitor (PGIP) 0.03 Archaeplastida
LOC_Os08g39940.1 No alias Polygalacturonase inhibitor 1 OS=Oryza sativa subsp.... 0.05 Archaeplastida
LOC_Os09g31450.1 No alias pathogen polygalacturonase inhibitor (PGIP) 0.04 Archaeplastida
Zm00001e002061_P001 No alias No annotation 0.04 Archaeplastida
Zm00001e029700_P001 No alias pathogen polygalacturonase inhibitor (PGIP) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 120 180
IPR001611 Leu-rich_rpt 261 297
IPR013210 LRR_N_plant-typ 29 67
No external refs found!