1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os07g38650.1

LOC_Os07g38650.1


Description : ubiquitin-fold protein (SUMO)


Gene families : OG0000850 (Archaeplastida) Phylogenetic Tree(s): OG0000850_tree ,
OG_05_0002291 (LandPlants) Phylogenetic Tree(s): OG_05_0002291_tree ,
OG_06_0067028 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g38650.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AT5G55855 No alias Ubiquitin-like superfamily protein 0.03 Archaeplastida
Zm00001e027843_P001 No alias ubiquitin-fold protein (SUMO) 0.03 Archaeplastida
Zm00001e035329_P001 No alias ubiquitin-fold protein (SUMO) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006333 chromatin assembly or disassembly IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009452 7-methylguanosine RNA capping IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0036260 RNA capping IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
InterPro domains Description Start Stop
IPR022617 Rad60/SUMO-like_dom 21 89
No external refs found!