LOC_Os07g38930.5

Description : Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana (sp|q94cd8|e134_arath : 455.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 269.2)

Gene families : OG0000017 (Archaeplastida) Phylogenetic Tree(s): OG0000017_tree ,
OG_05_0000416 (LandPlants) Phylogenetic Tree(s): OG_05_0000416_tree ,
OG_06_0001258 (SeedPlants) Phylogenetic Tree(s): OG_06_0001258_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os07g38930.5
Cluster	HCCA: Cluster_340

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00037p00209440	evm_27.TU.AmTr_v1...	Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase	0.04	Archaeplastida
AMTR_s00056p00158530	evm_27.TU.AmTr_v1...	Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase	0.03	Archaeplastida
AMTR_s00059p00061500	evm_27.TU.AmTr_v1...	Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase	0.03	Archaeplastida
AMTR_s00100p00040750	evm_27.TU.AmTr_v1...	Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase	0.04	Archaeplastida
AMTR_s00112p00108890	evm_27.TU.AmTr_v1...	Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase	0.03	Archaeplastida
AMTR_s00117p00097230	evm_27.TU.AmTr_v1...	Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase	0.03	Archaeplastida
AT2G01630	No alias	O-Glycosyl hydrolases family 17 protein	0.05	Archaeplastida
AT4G29360	No alias	O-Glycosyl hydrolases family 17 protein	0.04	Archaeplastida
AT5G42100	BG_PPAP,...	beta-1,3-glucanase_putative	0.04	Archaeplastida
AT5G56590	No alias	O-Glycosyl hydrolases family 17 protein	0.09	Archaeplastida
GSVIVT01017331001	No alias	Enzyme classification.EC_3 hydrolases.EC_3.2...	0.02	Archaeplastida
GSVIVT01033542001	No alias	Enzyme classification.EC_3 hydrolases.EC_3.2...	0.03	Archaeplastida
GSVIVT01035013001	No alias	Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform...	0.03	Archaeplastida
Gb_02225	No alias	Probable glucan endo-1,3-beta-glucosidase A6...	0.02	Archaeplastida
Gb_04530	No alias	Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis...	0.04	Archaeplastida
Gb_13189	No alias	Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis...	0.03	Archaeplastida
Gb_13885	No alias	Probable glucan endo-1,3-beta-glucosidase A6...	0.02	Archaeplastida
Gb_17031	No alias	Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis...	0.03	Archaeplastida
Gb_19444	No alias	Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis...	0.05	Archaeplastida
Gb_31145	No alias	Probable glucan endo-1,3-beta-glucosidase A6...	0.03	Archaeplastida
MA_10429401g0010	No alias	Enzyme classification.EC_3 hydrolases.EC_3.2...	0.03	Archaeplastida
MA_10429783g0010	No alias	Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis...	0.06	Archaeplastida
Mp2g12210.1	No alias	Enzyme classification.EC_3 hydrolases.EC_3.2...	0.02	Archaeplastida
Pp3c10_5480V3.1	No alias	O-Glycosyl hydrolases family 17 protein	0.03	Archaeplastida
Pp3c12_13470V3.1	No alias	O-Glycosyl hydrolases family 17 protein	0.02	Archaeplastida
Pp3c16_15860V3.1	No alias	O-Glycosyl hydrolases family 17 protein	0.02	Archaeplastida
Pp3c17_13760V3.1	No alias	O-Glycosyl hydrolases family 17 protein	0.02	Archaeplastida
Smo102512	No alias	Enzyme classification.EC_3 hydrolases.EC_3.2...	0.02	Archaeplastida
Smo75479	No alias	Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana	0.07	Archaeplastida
Solyc02g080660.3.1	No alias	Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis...	0.04	Archaeplastida
Solyc04g007910.3.1	No alias	Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis...	0.04	Archaeplastida
Solyc05g054440.4.1	No alias	Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum...	0.03	Archaeplastida
Solyc06g073710.4.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc07g049370.2.1	No alias	Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis...	0.07	Archaeplastida
Solyc08g005000.4.1	No alias	Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis...	0.05	Archaeplastida
Solyc12g008580.2.1	No alias	Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis...	0.05	Archaeplastida
Solyc12g055840.2.1	No alias	Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis...	0.02	Archaeplastida
Zm00001e006501_P001	No alias	Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum...	0.02	Archaeplastida
Zm00001e010612_P001	No alias	Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis...	0.03	Archaeplastida
Zm00001e014030_P001	No alias	Enzyme classification.EC_3 hydrolases.EC_3.2...	0.03	Archaeplastida
Zm00001e019867_P001	No alias	Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis...	0.04	Archaeplastida
Zm00001e028340_P001	No alias	Enzyme classification.EC_3 hydrolases.EC_3.2...	0.02	Archaeplastida
Zm00001e033177_P001	No alias	Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum...	0.02	Archaeplastida
Zm00001e034610_P001	No alias	Probable glucan endo-1,3-beta-glucosidase A6...	0.02	Archaeplastida
Zm00001e035344_P001	No alias	Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis...	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEP	Neighborhood
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0003682	chromatin binding	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005338	nucleotide-sugar transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005507	copper ion binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
CC	GO:0005575	cellular_component	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
BP	GO:0006325	chromatin organization	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006479	protein methylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0006952	defense response	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
MF	GO:0008170	N-methyltransferase activity	IEP	Neighborhood
BP	GO:0008213	protein alkylation	IEP	Neighborhood
MF	GO:0008276	protein methyltransferase activity	IEP	Neighborhood
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Neighborhood
BP	GO:0009987	cellular process	IEP	Neighborhood
MF	GO:0015165	pyrimidine nucleotide-sugar transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015631	tubulin binding	IEP	Neighborhood
BP	GO:0015780	nucleotide-sugar transmembrane transport	IEP	Neighborhood
BP	GO:0015931	nucleobase-containing compound transport	IEP	Neighborhood
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Neighborhood
MF	GO:0016278	lysine N-methyltransferase activity	IEP	Neighborhood
MF	GO:0016279	protein-lysine N-methyltransferase activity	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016409	palmitoyltransferase activity	IEP	Neighborhood
BP	GO:0016569	covalent chromatin modification	IEP	Neighborhood
BP	GO:0016570	histone modification	IEP	Neighborhood
BP	GO:0016571	histone methylation	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
BP	GO:0018022	peptidyl-lysine methylation	IEP	Neighborhood
MF	GO:0018024	histone-lysine N-methyltransferase activity	IEP	Neighborhood
BP	GO:0018193	peptidyl-amino acid modification	IEP	Neighborhood
BP	GO:0018205	peptidyl-lysine modification	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
CC	GO:0031090	organelle membrane	IEP	Neighborhood
BP	GO:0032259	methylation	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
BP	GO:0034968	histone lysine methylation	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
MF	GO:0042054	histone methyltransferase activity	IEP	Neighborhood
MF	GO:0043015	gamma-tubulin binding	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
CC	GO:0043226	organelle	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043229	intracellular organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0043414	macromolecule methylation	IEP	Neighborhood
BP	GO:0044237	cellular metabolic process	IEP	Neighborhood
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
CC	GO:0044424	intracellular part	IEP	Neighborhood
CC	GO:0044431	Golgi apparatus part	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
BP	GO:0090481	pyrimidine nucleotide-sugar transmembrane transport	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
CC	GO:0098588	bounding membrane of organelle	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
BP	GO:1901264	carbohydrate derivative transport	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR012946	X8	369	440
IPR000490	Glyco_hydro_17	31	352

External Links

No external refs found!

LOC_Os07g38930.5

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation