1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os07g38940.1

LOC_Os07g38940.1


Description : E2 conjugating component COP10 of COP10-DET1 (CDD) subcomplex


Gene families : OG0000275 (Archaeplastida) Phylogenetic Tree(s): OG0000275_tree ,
OG_05_0000172 (LandPlants) Phylogenetic Tree(s): OG_05_0000172_tree ,
OG_06_0011321 (SeedPlants) Phylogenetic Tree(s): OG_06_0011321_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g38940.1

Target Alias Description ECC score Gene Family Method Actions
Solyc08g008220.3.1 No alias conjugation E2 protein 0.03 Archaeplastida
Zm00001e010614_P001 No alias E2 conjugating component COP10 of COP10-DET1 (CDD) subcomplex 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004659 prenyltransferase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0008318 protein prenyltransferase activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
BP GO:0018342 protein prenylation IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0097354 prenylation IEP Neighborhood
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 63 195
No external refs found!