1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os07g39110.2

LOC_Os07g39110.2


Description : no hits & (original description: none)


Gene families : OG0000068 (Archaeplastida) Phylogenetic Tree(s): OG0000068_tree ,
OG_05_0000090 (LandPlants) Phylogenetic Tree(s): OG_05_0000090_tree ,
OG_06_0000054 (SeedPlants) Phylogenetic Tree(s): OG_06_0000054_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g39110.2
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00225230 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.06 Archaeplastida
AMTR_s00024p00227390 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AMTR_s00058p00216470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00066p00028460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 Archaeplastida
AT2G28550 RAP2.7, TOE1 related to AP2.7 0.04 Archaeplastida
AT3G20840 PLT1 Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT3G54320 WRI1, ATWRI1, ASML1, WRI Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT3G54990 SMZ Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT5G57390 AIL5, EMK, CHO1 AINTEGUMENTA-like 5 0.03 Archaeplastida
GSVIVT01023697001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01025307001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
Gb_11937 No alias transcription factor (AP2) 0.02 Archaeplastida
Gb_29561 No alias transcription factor (AP2) 0.06 Archaeplastida
Gb_39931 No alias transcription factor (AP2) 0.04 Archaeplastida
Gb_41702 No alias transcription factor (AP2) 0.04 Archaeplastida
LOC_Os06g05340.1 No alias transcription factor (AP2). RAM1-dependent transcription... 0.03 Archaeplastida
MA_196219g0010 No alias transcription factor (AP2) 0.02 Archaeplastida
Mp8g11450.1 No alias transcription factor (AP2) 0.02 Archaeplastida
Pp3c10_24550V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Solyc02g064960.3.1 No alias transcription factor (AP2) 0.02 Archaeplastida
Solyc02g092050.3.1 No alias transcription factor (AP2) 0.04 Archaeplastida
Solyc04g077490.3.1 No alias transcription factor (AP2) 0.03 Archaeplastida
Solyc11g061750.2.1 No alias transcription factor (AP2) 0.03 Archaeplastida
Zm00001e006752_P001 No alias transcription factor (AP2) 0.05 Archaeplastida
Zm00001e011539_P001 No alias transcription factor (AP2) 0.02 Archaeplastida
Zm00001e015104_P001 No alias transcription factor (AP2) 0.02 Archaeplastida
Zm00001e018951_P001 No alias transcription factor (AP2) 0.03 Archaeplastida
Zm00001e019489_P001 No alias transcription factor (AP2) 0.02 Archaeplastida
Zm00001e038652_P002 No alias transcription factor (AP2) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!