LOC_Os07g40580.1


Description : poly-P/G elongation factor (eEF5/eIF5A)


Gene families : OG0001989 (Archaeplastida) Phylogenetic Tree(s): OG0001989_tree ,
OG_05_0002024 (LandPlants) Phylogenetic Tree(s): OG_05_0002024_tree ,
OG_06_0001839 (SeedPlants) Phylogenetic Tree(s): OG_06_0001839_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g40580.1
Cluster HCCA: Cluster_360

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01007954001 No alias Protein biosynthesis.translation elongation.eEF5(eIF5A)... 0.03 Archaeplastida
Solyc03g115650.4.1 No alias poly-P/G elongation factor (eEF5/eIF5A) 0.03 Archaeplastida
Zm00001e010696_P001 No alias poly-P/G elongation factor (eEF5/eIF5A) 0.02 Archaeplastida
Zm00001e035464_P002 No alias poly-P/G elongation factor (eEF5/eIF5A) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003746 translation elongation factor activity IEA Interproscan
MF GO:0043022 ribosome binding IEA Interproscan
BP GO:0045901 positive regulation of translational elongation IEA Interproscan
BP GO:0045905 positive regulation of translational termination IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0004363 glutathione synthase activity IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
CC GO:0005885 Arp2/3 protein complex IEP Neighborhood
BP GO:0006534 cysteine metabolic process IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006749 glutathione metabolic process IEP Neighborhood
BP GO:0006750 glutathione biosynthetic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0007015 actin filament organization IEP Neighborhood
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009092 homoserine metabolic process IEP Neighborhood
BP GO:0010638 positive regulation of organelle organization IEP Neighborhood
MF GO:0016151 nickel cation binding IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Neighborhood
BP GO:0019346 transsulfuration IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0030832 regulation of actin filament length IEP Neighborhood
BP GO:0030833 regulation of actin filament polymerization IEP Neighborhood
BP GO:0030838 positive regulation of actin filament polymerization IEP Neighborhood
BP GO:0031334 positive regulation of protein complex assembly IEP Neighborhood
BP GO:0032271 regulation of protein polymerization IEP Neighborhood
BP GO:0032273 positive regulation of protein polymerization IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0032956 regulation of actin cytoskeleton organization IEP Neighborhood
BP GO:0032970 regulation of actin filament-based process IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Neighborhood
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Neighborhood
BP GO:0043254 regulation of protein complex assembly IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044089 positive regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:0045010 actin nucleation IEP Neighborhood
BP GO:0050667 homocysteine metabolic process IEP Neighborhood
BP GO:0051493 regulation of cytoskeleton organization IEP Neighborhood
BP GO:0051495 positive regulation of cytoskeleton organization IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0097435 supramolecular fiber organization IEP Neighborhood
BP GO:0110053 regulation of actin filament organization IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1902903 regulation of supramolecular fiber organization IEP Neighborhood
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Neighborhood
InterPro domains Description Start Stop
IPR020189 Transl_elong_IF5A_C 86 155
No external refs found!