Description : class-II histone deacetylase
Gene families : OG0001854 (Archaeplastida) Phylogenetic Tree(s): OG0001854_tree ,
OG_05_0005415 (LandPlants) Phylogenetic Tree(s): OG_05_0005415_tree ,
OG_06_0006816 (SeedPlants) Phylogenetic Tree(s): OG_06_0006816_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os07g41090.1 | |
Cluster | HCCA: Cluster_40 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000093.133 | No alias | Histone deacetylase 5 OS=Arabidopsis thaliana | 0.01 | Archaeplastida | |
Solyc03g115150.4.1 | No alias | class-II histone deacetylase | 0.06 | Archaeplastida | |
Zm00001e032874_P003 | No alias | class-II histone deacetylase | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003774 | motor activity | IEP | Neighborhood |
MF | GO:0004386 | helicase activity | IEP | Neighborhood |
CC | GO:0016459 | myosin complex | IEP | Neighborhood |
MF | GO:0016462 | pyrophosphatase activity | IEP | Neighborhood |
BP | GO:0016579 | protein deubiquitination | IEP | Neighborhood |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Neighborhood |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Neighborhood |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Neighborhood |
MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Neighborhood |
CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEP | Neighborhood |
CC | GO:0044422 | organelle part | IEP | Neighborhood |
CC | GO:0044428 | nuclear part | IEP | Neighborhood |
CC | GO:0044430 | cytoskeletal part | IEP | Neighborhood |
CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
CC | GO:0070531 | BRCA1-A complex | IEP | Neighborhood |
CC | GO:0070552 | BRISC complex | IEP | Neighborhood |
BP | GO:0070646 | protein modification by small protein removal | IEP | Neighborhood |
MF | GO:0101005 | ubiquitinyl hydrolase activity | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR023801 | His_deacetylse_dom | 32 | 332 |
No external refs found! |