1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os07g41160.1

LOC_Os07g41160.1


Description : transcriptional co-repressor (AFP/NINJA)


Gene families : OG0000721 (Archaeplastida) Phylogenetic Tree(s): OG0000721_tree ,
OG_05_0000424 (LandPlants) Phylogenetic Tree(s): OG_05_0000424_tree ,
OG_06_0000404 (SeedPlants) Phylogenetic Tree(s): OG_06_0000404_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g41160.1
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00255370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.03 Archaeplastida
AT1G69260 AFP1 ABI five binding protein 0.11 Archaeplastida
AT3G29575 AFP3 ABI five binding protein 3 0.07 Archaeplastida
GSVIVT01003927001 No alias RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.06 Archaeplastida
GSVIVT01008104001 No alias RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.05 Archaeplastida
GSVIVT01012225001 No alias RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.05 Archaeplastida
Gb_29524 No alias transcriptional co-repressor (AFP/NINJA) 0.02 Archaeplastida
MA_16384g0010 No alias transcriptional co-repressor (AFP/NINJA) 0.02 Archaeplastida
MA_2575g0010 No alias transcriptional co-repressor (AFP/NINJA) 0.06 Archaeplastida
Smo446487 No alias RNA biosynthesis.transcriptional repression.AFP/NINJA... 0.04 Archaeplastida
Solyc02g066905.1.1 No alias transcriptional co-repressor (AFP/NINJA) 0.02 Archaeplastida
Solyc04g005380.3.1 No alias transcriptional co-repressor (AFP/NINJA) 0.04 Archaeplastida
Zm00001e035495_P001 No alias transcriptional co-repressor (AFP/NINJA) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004618 phosphoglycerate kinase activity IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006090 pyruvate metabolic process IEP Neighborhood
BP GO:0006096 glycolytic process IEP Neighborhood
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006757 ATP generation from ADP IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009132 nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009166 nucleotide catabolic process IEP Neighborhood
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Neighborhood
BP GO:0042866 pyruvate biosynthetic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0046031 ADP metabolic process IEP Neighborhood
BP GO:0046939 nucleotide phosphorylation IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901292 nucleoside phosphate catabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR012463 Ninja_motif 28 66
IPR032310 NINJA_B 92 135
IPR032308 Jas 243 310
No external refs found!