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  5. LOC_Os07g41580.1

LOC_Os07g41580.1


Description : component NF-YB of NF-Y transcription factor complex


Gene families : OG0000142 (Archaeplastida) Phylogenetic Tree(s): OG0000142_tree ,
OG_05_0000244 (LandPlants) Phylogenetic Tree(s): OG_05_0000244_tree ,
OG_06_0000165 (SeedPlants) Phylogenetic Tree(s): OG_06_0000165_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g41580.1
Cluster HCCA: Cluster_362

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00239530 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NF-Y... 0.03 Archaeplastida
AMTR_s00057p00202310 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NF-Y... 0.04 Archaeplastida
AT5G08190 NF-YB12 nuclear factor Y, subunit B12 0.03 Archaeplastida
AT5G47670 NF-YB6, L1L nuclear factor Y, subunit B6 0.03 Archaeplastida
GSVIVT01002895001 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.02 Archaeplastida
GSVIVT01014673001 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.04 Archaeplastida
GSVIVT01014690001 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.03 Archaeplastida
GSVIVT01017741001 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.06 Archaeplastida
GSVIVT01022214001 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.08 Archaeplastida
Gb_07866 No alias component NF-YB of NF-Y transcription factor complex 0.11 Archaeplastida
Solyc04g015060.3.1 No alias component NF-YB of NF-Y transcription factor complex 0.03 Archaeplastida
Solyc05g005440.3.1 No alias component NF-YB of NF-Y transcription factor complex 0.03 Archaeplastida
Solyc05g015550.2.1 No alias component NF-YB of NF-Y transcription factor complex 0.03 Archaeplastida
Solyc09g074760.1.1 No alias component NF-YB of NF-Y transcription factor complex 0.03 Archaeplastida
Solyc10g009440.4.1 No alias component NF-YB of NF-Y transcription factor complex 0.03 Archaeplastida
Zm00001e010728_P001 No alias component NF-YB of NF-Y transcription factor complex 0.08 Archaeplastida
Zm00001e015700_P001 No alias component NF-YB of NF-Y transcription factor complex 0.04 Archaeplastida
Zm00001e021676_P001 No alias component NF-YB of NF-Y transcription factor complex 0.04 Archaeplastida
Zm00001e035517_P001 No alias component NF-YB of NF-Y transcription factor complex 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 26 90
No external refs found!