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  5. LOC_Os07g41600.1

LOC_Os07g41600.1


Description : no hits & (original description: none)


Gene families : OG0003369 (Archaeplastida) Phylogenetic Tree(s): OG0003369_tree ,
OG_05_0002316 (LandPlants) Phylogenetic Tree(s): OG_05_0002316_tree ,
OG_06_0001306 (SeedPlants) Phylogenetic Tree(s): OG_06_0001306_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g41600.1
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
AT1G51090 No alias Heavy metal transport/detoxification superfamily protein 0.05 Archaeplastida
GSVIVT01003498001 No alias No description available 0.05 Archaeplastida
GSVIVT01005123001 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
GSVIVT01005124001 No alias No description available 0.04 Archaeplastida
GSVIVT01005128001 No alias No description available 0.07 Archaeplastida
GSVIVT01029956001 No alias No description available 0.03 Archaeplastida
LOC_Os03g29920.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g54050.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g32860.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e021138_P003 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e040799_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!