1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os07g42300.1

LOC_Os07g42300.1


Description : component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex


Gene families : OG0001823 (Archaeplastida) Phylogenetic Tree(s): OG0001823_tree ,
OG_05_0001820 (LandPlants) Phylogenetic Tree(s): OG_05_0001820_tree ,
OG_06_0001499 (SeedPlants) Phylogenetic Tree(s): OG_06_0001499_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g42300.1
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00132010 evm_27.TU.AmTr_v1... Protein biosynthesis.translation elongation.eEF1B... 0.03 Archaeplastida
AT5G19510 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.08 Archaeplastida
GSVIVT01008526001 No alias Protein biosynthesis.translation elongation.eEF1B... 0.06 Archaeplastida
GSVIVT01037374001 No alias Protein biosynthesis.translation elongation.eEF1B... 0.08 Archaeplastida
Gb_07694 No alias component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.02 Archaeplastida
MA_102713g0020 No alias component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.07 Archaeplastida
MA_8253027g0010 No alias component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.02 Archaeplastida
Pp3c10_15140V3.1 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.03 Archaeplastida
Solyc01g098000.3.1 No alias component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.12 Archaeplastida
Solyc07g016150.4.1 No alias component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.16 Archaeplastida
Solyc11g072190.2.1 No alias component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.11 Archaeplastida
Zm00001e027167_P001 No alias component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.04 Archaeplastida
Zm00001e035548_P001 No alias component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEA Interproscan
BP GO:0006414 translational elongation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Neighborhood
BP GO:0000469 cleavage involved in rRNA processing IEP Neighborhood
BP GO:0001510 RNA methylation IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
CC GO:0008250 oligosaccharyltransferase complex IEP Neighborhood
MF GO:0008649 rRNA methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
MF GO:0016435 rRNA (guanine) methyltransferase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0031167 rRNA methylation IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0036265 RNA (guanine-N7)-methylation IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0070475 rRNA base methylation IEP Neighborhood
BP GO:0070476 rRNA (guanine-N7)-methylation IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Neighborhood
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR014038 EF1B_bsu/dsu_GNE 142 229
No external refs found!