1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os07g42500.1

LOC_Os07g42500.1


Description : no hits & (original description: none)


Gene families : OG0001741 (Archaeplastida) Phylogenetic Tree(s): OG0001741_tree ,
OG_05_0004381 (LandPlants) Phylogenetic Tree(s): OG_05_0004381_tree ,
OG_06_0005417 (SeedPlants) Phylogenetic Tree(s): OG_06_0005417_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g42500.1
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00011660 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
Gb_38623 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
InterPro domains Description Start Stop
IPR000306 Znf_FYVE 148 213
IPR007461 Ysc84_actin-binding 330 455
No external refs found!