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  5. LOC_Os07g43380.1

LOC_Os07g43380.1


Description : E3 ubiquitin-protein ligase RKP OS=Arabidopsis thaliana (sp|q9siz8|rkp_arath : 393.0)


Gene families : OG0004941 (Archaeplastida) Phylogenetic Tree(s): OG0004941_tree ,
OG_05_0004941 (LandPlants) Phylogenetic Tree(s): OG_05_0004941_tree ,
OG_06_0010012 (SeedPlants) Phylogenetic Tree(s): OG_06_0010012_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g43380.1
Cluster HCCA: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
Cre12.g519150 No alias E3 ubiquitin-protein ligase RKP OS=Arabidopsis thaliana 0.02 Archaeplastida
Zm00001e035603_P001 No alias E3 ubiquitin-protein ligase RKP OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015693 magnesium ion transport IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!