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  5. LOC_Os07g43600.1

LOC_Os07g43600.1


Description : Intracellular ribonuclease LX OS=Solanum lycopersicum (sp|p80196|rnlx_sollc : 128.0)


Gene families : OG0000815 (Archaeplastida) Phylogenetic Tree(s): OG0000815_tree ,
OG_05_0031052 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0029228 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g43600.1
Cluster HCCA: Cluster_476

Target Alias Description ECC score Gene Family Method Actions
AT2G02990 ATRNS1, RNS1 ribonuclease 1 0.07 Archaeplastida
Gb_38141 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_4032367g0010 No alias Ribonuclease 3 OS=Arabidopsis thaliana... 0.01 Archaeplastida
MA_9272140g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_95383g0020 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc05g007940.3.1 No alias Intracellular ribonuclease LX OS=Solanum lycopersicum... 0.02 Archaeplastida
Solyc06g082890.4.1 No alias Ribonuclease 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0033897 ribonuclease T2 activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001568 RNase_T2-like 30 214
No external refs found!