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  5. LOC_Os07g43670.1

LOC_Os07g43670.1


Description : Ribonuclease 1 OS=Arabidopsis thaliana (sp|p42813|rns1_arath : 213.0)


Gene families : OG0000815 (Archaeplastida) Phylogenetic Tree(s): OG0000815_tree ,
OG_05_0002179 (LandPlants) Phylogenetic Tree(s): OG_05_0002179_tree ,
OG_06_0025380 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g43670.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00262550 evm_27.TU.AmTr_v1... Extracellular ribonuclease LE OS=Solanum lycopersicum 0.03 Archaeplastida
AMTR_s00064p00083000 evm_27.TU.AmTr_v1... Ribonuclease 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G26820 RNS3 ribonuclease 3 0.02 Archaeplastida
Cre03.g160953 No alias No description available 0.01 Archaeplastida
Gb_30835 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_30836 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os09g36700.1 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.01 Archaeplastida
MA_10433186g0010 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_4032367g0010 No alias Ribonuclease 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_9272140g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_95383g0020 No alias Ribonuclease 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Smo270532 No alias Extracellular ribonuclease LE OS=Solanum lycopersicum 0.03 Archaeplastida
Smo75785 No alias Extracellular ribonuclease LE OS=Solanum lycopersicum 0.01 Archaeplastida
Solyc04g005640.3.1 No alias Intracellular ribonuclease LX OS=Solanum lycopersicum... 0.02 Archaeplastida
Solyc05g007940.3.1 No alias Intracellular ribonuclease LX OS=Solanum lycopersicum... 0.04 Archaeplastida
Solyc05g007950.4.1 No alias Extracellular ribonuclease LE OS=Solanum lycopersicum... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0033897 ribonuclease T2 activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001568 RNase_T2-like 23 239
No external refs found!