1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os07g43740.1

LOC_Os07g43740.1


Description : no hits & (original description: none)


Gene families : OG0000041 (Archaeplastida) Phylogenetic Tree(s): OG0000041_tree ,
OG_05_0000046 (LandPlants) Phylogenetic Tree(s): OG_05_0000046_tree ,
OG_06_0003606 (SeedPlants) Phylogenetic Tree(s): OG_06_0003606_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g43740.1
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
AT1G14200 No alias RING/U-box superfamily protein 0.1 Archaeplastida
AT1G26800 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT1G55530 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT3G10815 No alias RING/U-box superfamily protein 0.05 Archaeplastida
Cpa|evm.model.tig00000571.7 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
LOC_Os03g26300.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp7g15970.1 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.01 Archaeplastida
Pp3c1_42450V3.1 No alias RING/U-box superfamily protein 0.01 Archaeplastida
Smo18753 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
Solyc05g007895.1.1 No alias E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis... 0.22 Archaeplastida
Zm00001e010857_P001 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e011788_P002 No alias E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e024003_P001 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.02 Archaeplastida
Zm00001e025062_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 88 127
No external refs found!