LOC_Os07g44040.1

Description : A-class RAB GTPase

Gene families : OG0002814 (Archaeplastida) Phylogenetic Tree(s): OG0002814_tree ,
OG_05_0001892 (LandPlants) Phylogenetic Tree(s): OG_05_0001892_tree ,
OG_06_0009418 (SeedPlants) Phylogenetic Tree(s): OG_06_0009418_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os07g44040.1
Cluster	HCCA: Cluster_48

Target	Alias	Description	ECC score	Gene Family Method	Actions
AMTR_s00148p00100780	evm_27.TU.AmTr_v1...	Ras-related protein RABA5a OS=Arabidopsis thaliana	0.02	Archaeplastida
Gb_34717	No alias	A-class RAB GTPase	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005484	SNAP receptor activity	IEP	Neighborhood
MF	GO:0005507	copper ion binding	IEP	Neighborhood
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to ER	IEP	Neighborhood
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Neighborhood
BP	GO:0048193	Golgi vesicle transport	IEP	Neighborhood
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	16	176

External Links

No external refs found!