LOC_Os07g46460.1

Description : Fd-dependent glutamate synthase

Gene families : OG0000917 (Archaeplastida) Phylogenetic Tree(s): OG0000917_tree ,
OG_05_0005084 (LandPlants) Phylogenetic Tree(s): OG_05_0005084_tree ,
OG_06_0005348 (SeedPlants) Phylogenetic Tree(s): OG_06_0005348_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os07g46460.1
Cluster	HCCA: Cluster_321

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00063p00191490	evm_27.TU.AmTr_v1...	Nutrient uptake.nitrogen assimilation.ammonium...	0.07	Archaeplastida
AT5G04140	GLU1, FD-GOGAT,...	glutamate synthase 1	0.14	Archaeplastida
Cpa\|evm.model.tig00001085.5	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.4...	0.02	Archaeplastida
Cpa\|evm.model.tig00001085.6	No alias	Ferredoxin-dependent glutamate synthase, chloroplastic...	0.02	Archaeplastida
Cpa\|evm.model.tig00001085.7	No alias	Ferredoxin-dependent glutamate synthase 1,...	0.02	Archaeplastida
Cre12.g514050	No alias	Nutrient uptake.nitrogen assimilation.ammonium...	0.05	Archaeplastida
Cre13.g592200	No alias	Nutrient uptake.nitrogen assimilation.ammonium...	0.02	Archaeplastida
GSVIVT01033621001	No alias	Nutrient uptake.nitrogen assimilation.ammonium...	0.11	Archaeplastida
Gb_17851	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.4...	0.08	Archaeplastida
MA_14333g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_185611g0010	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.4...	0.07	Archaeplastida
MA_8079124g0010	No alias	Ferredoxin-dependent glutamate synthase 2, chloroplastic...	0.02	Archaeplastida
Mp2g10580.1	No alias	Fd-dependent glutamate synthase	0.07	Archaeplastida
Pp3c8_17940V3.1	No alias	glutamate synthase 1	0.1	Archaeplastida
Smo155359	No alias	Nutrient uptake.nitrogen assimilation.ammonium...	0.11	Archaeplastida
Solyc03g063560.3.1	No alias	Fd-dependent glutamate synthase	0.18	Archaeplastida
Zm00001e035758_P001	No alias	Fd-dependent glutamate synthase	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006536	glutamate metabolic process	None	Extended
BP	GO:0006537	glutamate biosynthetic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	cellular amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009064	glutamine family amino acid metabolic process	None	Extended
BP	GO:0009084	glutamine family amino acid biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015930	glutamate synthase activity	IEA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016491	oxidoreductase activity	IEA	Interproscan
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043648	dicarboxylic acid metabolic process	None	Extended
BP	GO:0043650	dicarboxylic acid biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0001882	nucleoside binding	IEP	Neighborhood
MF	GO:0001883	purine nucleoside binding	IEP	Neighborhood
MF	GO:0003873	6-phosphofructo-2-kinase activity	IEP	Neighborhood
MF	GO:0003924	GTPase activity	IEP	Neighborhood
MF	GO:0004175	endopeptidase activity	IEP	Neighborhood
MF	GO:0004356	glutamate-ammonia ligase activity	IEP	Neighborhood
MF	GO:0004751	ribose-5-phosphate isomerase activity	IEP	Neighborhood
MF	GO:0004813	alanine-tRNA ligase activity	IEP	Neighborhood
MF	GO:0005315	inorganic phosphate transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
MF	GO:0005525	GTP binding	IEP	Neighborhood
CC	GO:0005779	integral component of peroxisomal membrane	IEP	Neighborhood
BP	GO:0006000	fructose metabolic process	IEP	Neighborhood
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Neighborhood
BP	GO:0006413	translational initiation	IEP	Neighborhood
BP	GO:0006419	alanyl-tRNA aminoacylation	IEP	Neighborhood
BP	GO:0006541	glutamine metabolic process	IEP	Neighborhood
BP	GO:0006542	glutamine biosynthetic process	IEP	Neighborhood
BP	GO:0006817	phosphate ion transport	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
MF	GO:0008236	serine-type peptidase activity	IEP	Neighborhood
MF	GO:0008443	phosphofructokinase activity	IEP	Neighborhood
MF	GO:0008942	nitrite reductase [NAD(P)H] activity	IEP	Neighborhood
BP	GO:0009052	pentose-phosphate shunt, non-oxidative branch	IEP	Neighborhood
CC	GO:0009507	chloroplast	IEP	Neighborhood
CC	GO:0009536	plastid	IEP	Neighborhood
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
MF	GO:0016211	ammonia ligase activity	IEP	Neighborhood
MF	GO:0016462	pyrophosphatase activity	IEP	Neighborhood
BP	GO:0016559	peroxisome fission	IEP	Neighborhood
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	Neighborhood
MF	GO:0016661	oxidoreductase activity, acting on other nitrogenous compounds as donors	IEP	Neighborhood
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Neighborhood
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Neighborhood
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Neighborhood
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Neighborhood
MF	GO:0016853	isomerase activity	IEP	Neighborhood
MF	GO:0016854	racemase and epimerase activity	IEP	Neighborhood
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	Neighborhood
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Neighborhood
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	Neighborhood
MF	GO:0016874	ligase activity	IEP	Neighborhood
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	Neighborhood
MF	GO:0016887	ATPase activity	IEP	Neighborhood
BP	GO:0017038	protein import	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Neighborhood
MF	GO:0017171	serine hydrolase activity	IEP	Neighborhood
MF	GO:0019001	guanyl nucleotide binding	IEP	Neighborhood
MF	GO:0019200	carbohydrate kinase activity	IEP	Neighborhood
BP	GO:0019318	hexose metabolic process	IEP	Neighborhood
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Neighborhood
MF	GO:0022804	active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0030554	adenyl nucleotide binding	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
CC	GO:0031231	intrinsic component of peroxisomal membrane	IEP	Neighborhood
CC	GO:0031300	intrinsic component of organelle membrane	IEP	Neighborhood
CC	GO:0031301	integral component of organelle membrane	IEP	Neighborhood
MF	GO:0032549	ribonucleoside binding	IEP	Neighborhood
MF	GO:0032550	purine ribonucleoside binding	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Neighborhood
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Neighborhood
MF	GO:0033743	peptide-methionine (R)-S-oxide reductase activity	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
MF	GO:0036094	small molecule binding	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
CC	GO:0044438	microbody part	IEP	Neighborhood
CC	GO:0044439	peroxisomal part	IEP	Neighborhood
MF	GO:0046857	oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor	IEP	Neighborhood
BP	GO:0048285	organelle fission	IEP	Neighborhood
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
MF	GO:0098809	nitrite reductase activity	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood
MF	GO:2001070	starch binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002932	Glu_synthdom	897	1281
IPR006982	Glu_synth_centr_N	546	838
IPR017932	GATase_2_dom	97	519
IPR002489	Glu_synth_asu_C	1363	1546

External Links

No external refs found!

LOC_Os07g46460.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation