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  5. AMTR_s00009p00015960

AMTR_s00009p00015960 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.3

Description : Alpha-L-fucosidase 1 OS=Arabidopsis thaliana


Gene families : OG0001434 (Archaeplastida) Phylogenetic Tree(s): OG0001434_tree ,
OG_05_0001016 (LandPlants) Phylogenetic Tree(s): OG_05_0001016_tree ,
OG_06_0001849 (SeedPlants) Phylogenetic Tree(s): OG_06_0001849_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00015960
Cluster HCCA: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
Gb_14859 No alias Alpha-L-fucosidase 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc03g006980.4.1 No alias Alpha-L-fucosidase 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e010188_P001 No alias Alpha-L-fucosidase 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004560 alpha-L-fucosidase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
InterPro domains Description Start Stop
IPR000933 Glyco_hydro_29 63 156
No external refs found!