LOC_Os07g46750.1

Description : component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex

Gene families : OG0001823 (Archaeplastida) Phylogenetic Tree(s): OG0001823_tree ,
OG_05_0001820 (LandPlants) Phylogenetic Tree(s): OG_05_0001820_tree ,
OG_06_0001499 (SeedPlants) Phylogenetic Tree(s): OG_06_0001499_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os07g46750.1
Cluster	HCCA: Cluster_140

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00029p00211240	evm_27.TU.AmTr_v1...	Protein biosynthesis.translation elongation.eEF1B...	0.06	Archaeplastida
AT1G30230	No alias	Glutathione S-transferase, C-terminal-like;Translation...	0.04	Archaeplastida
AT5G19510	No alias	Translation elongation factor EF1B/ribosomal protein S6...	0.3	Archaeplastida
Cpa\|evm.model.tig00000093.158	No alias	Protein biosynthesis.translation elongation.eEF1B...	0.01	Archaeplastida
Cpa\|evm.model.tig00001126.9	No alias	Protein biosynthesis.translation elongation.eEF1B...	0.01	Archaeplastida
GSVIVT01008526001	No alias	Protein biosynthesis.translation elongation.eEF1B...	0.11	Archaeplastida
GSVIVT01037374001	No alias	Protein biosynthesis.translation elongation.eEF1B...	0.24	Archaeplastida
Gb_07694	No alias	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.06	Archaeplastida
MA_102713g0020	No alias	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.2	Archaeplastida
MA_7567986g0010	No alias	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.02	Archaeplastida
MA_8253027g0010	No alias	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.03	Archaeplastida
Mp8g01660.1	No alias	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.06	Archaeplastida
Pp3c10_15140V3.1	No alias	Translation elongation factor EF1B/ribosomal protein S6...	0.03	Archaeplastida
Smo94371	No alias	Protein biosynthesis.translation elongation.eEF1B...	0.03	Archaeplastida
Solyc01g098000.3.1	No alias	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.22	Archaeplastida
Solyc07g016150.4.1	No alias	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.18	Archaeplastida
Solyc11g072190.2.1	No alias	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.26	Archaeplastida
Zm00001e027167_P001	No alias	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.08	Archaeplastida
Zm00001e035548_P001	No alias	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.08	Archaeplastida
Zm00001e035783_P001	No alias	component eEF1B-beta/-delta of eEF1B eEF1A-GDP-recycling complex	0.08	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003746	translation elongation factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006414	translational elongation	IEA	Interproscan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Neighborhood
MF	GO:0001882	nucleoside binding	IEP	Neighborhood
MF	GO:0001883	purine nucleoside binding	IEP	Neighborhood
MF	GO:0002161	aminoacyl-tRNA editing activity	IEP	Neighborhood
MF	GO:0003735	structural constituent of ribosome	IEP	Neighborhood
MF	GO:0003924	GTPase activity	IEP	Neighborhood
MF	GO:0004019	adenylosuccinate synthase activity	IEP	Neighborhood
MF	GO:0004298	threonine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0005198	structural molecule activity	IEP	Neighborhood
MF	GO:0005525	GTP binding	IEP	Neighborhood
CC	GO:0005575	cellular_component	IEP	Neighborhood
CC	GO:0005739	mitochondrion	IEP	Neighborhood
CC	GO:0005783	endoplasmic reticulum	IEP	Neighborhood
CC	GO:0005839	proteasome core complex	IEP	Neighborhood
CC	GO:0005840	ribosome	IEP	Neighborhood
BP	GO:0006163	purine nucleotide metabolic process	IEP	Neighborhood
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0006400	tRNA modification	IEP	Neighborhood
BP	GO:0006412	translation	IEP	Neighborhood
BP	GO:0006518	peptide metabolic process	IEP	Neighborhood
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
MF	GO:0008173	RNA methyltransferase activity	IEP	Neighborhood
MF	GO:0008175	tRNA methyltransferase activity	IEP	Neighborhood
MF	GO:0008176	tRNA (guanine-N7-)-methyltransferase activity	IEP	Neighborhood
BP	GO:0009117	nucleotide metabolic process	IEP	Neighborhood
BP	GO:0009165	nucleotide biosynthetic process	IEP	Neighborhood
MF	GO:0016423	tRNA (guanine) methyltransferase activity	IEP	Neighborhood
MF	GO:0016462	pyrophosphatase activity	IEP	Neighborhood
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Neighborhood
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Neighborhood
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Neighborhood
MF	GO:0019001	guanyl nucleotide binding	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	Neighborhood
MF	GO:0019843	rRNA binding	IEP	Neighborhood
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Neighborhood
MF	GO:0032549	ribonucleoside binding	IEP	Neighborhood
MF	GO:0032550	purine ribonucleoside binding	IEP	Neighborhood
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Neighborhood
CC	GO:0032991	protein-containing complex	IEP	Neighborhood
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0042254	ribosome biogenesis	IEP	Neighborhood
BP	GO:0043043	peptide biosynthetic process	IEP	Neighborhood
CC	GO:0043226	organelle	IEP	Neighborhood
CC	GO:0043228	non-membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043229	intracellular organelle	IEP	Neighborhood
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Neighborhood
BP	GO:0043603	cellular amide metabolic process	IEP	Neighborhood
BP	GO:0043604	amide biosynthetic process	IEP	Neighborhood
BP	GO:0044085	cellular component biogenesis	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Neighborhood
CC	GO:0044424	intracellular part	IEP	Neighborhood
CC	GO:0044444	cytoplasmic part	IEP	Neighborhood
CC	GO:0044455	mitochondrial membrane part	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Neighborhood
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Neighborhood
MF	GO:0070003	threonine-type peptidase activity	IEP	Neighborhood
BP	GO:0071840	cellular component organization or biogenesis	IEP	Neighborhood
BP	GO:0072521	purine-containing compound metabolic process	IEP	Neighborhood
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	Neighborhood
BP	GO:0090407	organophosphate biosynthetic process	IEP	Neighborhood
CC	GO:0098798	mitochondrial protein complex	IEP	Neighborhood
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	Neighborhood
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Neighborhood
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Neighborhood
CC	GO:1990904	ribonucleoprotein complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR014038	EF1B_bsu/dsu_GNE	137	224

External Links

No external refs found!

LOC_Os07g46750.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation