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  5. LOC_Os07g46846.1

LOC_Os07g46846.1


Description : Short-chain dehydrogenase reductase 4 OS=Arabidopsis thaliana (sp|f4j2z7|sdr4_arath : 188.0)


Gene families : OG0000154 (Archaeplastida) Phylogenetic Tree(s): OG0000154_tree ,
OG_05_0000088 (LandPlants) Phylogenetic Tree(s): OG_05_0000088_tree ,
OG_06_0014409 (SeedPlants) Phylogenetic Tree(s): OG_06_0014409_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g46846.1
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00244570 evm_27.TU.AmTr_v1... Secoisolariciresinol dehydrogenase (Fragment)... 0.02 Archaeplastida
AT2G47140 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Archaeplastida
AT3G42960 ATA1, TA1, ASD TAPETUM 1 0.03 Archaeplastida
Gb_05035 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
Gb_07560 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.07 Archaeplastida
Gb_07847 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Gb_11757 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 Archaeplastida
Gb_13572 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 Archaeplastida
Gb_16803 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 Archaeplastida
Gb_17570 No alias Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.03 Archaeplastida
Gb_19313 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
Gb_29691 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
Gb_30884 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 Archaeplastida
Gb_32338 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 Archaeplastida
Gb_32339 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 Archaeplastida
Gb_35796 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
Gb_35797 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
Gb_35889 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.04 Archaeplastida
Gb_40683 No alias Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.03 Archaeplastida
MA_10436701g0020 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
MA_107740g0010 No alias Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.02 Archaeplastida
MA_289156g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
MA_932914g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp1g06800.1 No alias Short-chain dehydrogenase reductase 3b OS=Arabidopsis... 0.02 Archaeplastida
Mp3g19140.1 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.03 Archaeplastida
Mp5g00680.1 No alias Short-chain dehydrogenase reductase 3c OS=Arabidopsis... 0.06 Archaeplastida
Solyc03g113300.4.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.05 Archaeplastida
Solyc10g083170.2.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
Solyc11g018600.1.1 No alias Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.02 Archaeplastida
Solyc12g056610.3.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.04 Archaeplastida
Solyc12g056710.3.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
Zm00001e008253_P002 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0019139 cytokinin dehydrogenase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!