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  5. LOC_Os07g47490.1

LOC_Os07g47490.1


Description : Probable indole-3-acetic acid-amido synthetase GH3.11 OS=Oryza sativa subsp. japonica (sp|p0c0m3|gh311_orysj : 1224.0)


Gene families : OG0000138 (Archaeplastida) Phylogenetic Tree(s): OG0000138_tree ,
OG_05_0000189 (LandPlants) Phylogenetic Tree(s): OG_05_0000189_tree ,
OG_06_0000290 (SeedPlants) Phylogenetic Tree(s): OG_06_0000290_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g47490.1
Cluster HCCA: Cluster_357

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00258580 evm_27.TU.AmTr_v1... Indole-3-acetic acid-amido synthetase GH3.10... 0.02 Archaeplastida
Zm00001e011159_P002 No alias Indole-3-acetic acid-amido synthetase GH3.17... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005484 SNAP receptor activity IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
InterPro domains Description Start Stop
IPR004993 GH3 17 566
No external refs found!