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  5. LOC_Os07g47710.1

LOC_Os07g47710.1


Description : component RPL22 of LSU proteome component


Gene families : OG0002238 (Archaeplastida) Phylogenetic Tree(s): OG0002238_tree ,
OG_05_0002172 (LandPlants) Phylogenetic Tree(s): OG_05_0002172_tree ,
OG_06_0002838 (SeedPlants) Phylogenetic Tree(s): OG_06_0002838_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g47710.1
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00189250 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 Archaeplastida
AT3G05560 No alias Ribosomal L22e protein family 0.31 Archaeplastida
AT5G27770 No alias Ribosomal L22e protein family 0.31 Archaeplastida
Cpa|evm.model.tig00001206.7 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 Archaeplastida
Cre07.g357850 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.26 Archaeplastida
GSVIVT01028021001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.18 Archaeplastida
GSVIVT01031130001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.25 Archaeplastida
GSVIVT01031158001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.2 Archaeplastida
GSVIVT01035141001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.24 Archaeplastida
Gb_08874 No alias component RPL22 of LSU proteome component 0.16 Archaeplastida
Gb_36164 No alias component RPL22 of LSU proteome component 0.18 Archaeplastida
MA_130453g0010 No alias component RPL22 of LSU proteome component 0.2 Archaeplastida
Mp4g02920.1 No alias component RPL22 of LSU proteome component 0.31 Archaeplastida
Pp3c11_630V3.1 No alias Ribosomal L22e protein family 0.23 Archaeplastida
Pp3c11_680V3.1 No alias Ribosomal L22e protein family 0.1 Archaeplastida
Pp3c16_17710V3.1 No alias Ribosomal L22e protein family 0.05 Archaeplastida
Pp3c1_120V3.1 No alias Ribosomal L22e protein family 0.3 Archaeplastida
Pp3c2_28500V3.1 No alias Ribosomal L22e protein family 0.32 Archaeplastida
Pp3c2_28510V3.1 No alias Ribosomal L22e protein family 0.32 Archaeplastida
Pp3c6_5370V3.1 No alias Ribosomal L22e protein family 0.04 Archaeplastida
Pp3c7_27030V3.1 No alias Ribosomal L22e protein family 0.12 Archaeplastida
Smo270704 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 Archaeplastida
Solyc01g099830.3.1 No alias component RPL22 of LSU proteome component 0.33 Archaeplastida
Solyc09g075150.3.1 No alias component RPL22 of LSU proteome component 0.09 Archaeplastida
Solyc09g075155.1.1 No alias component RPL22 of LSU proteome component 0.16 Archaeplastida
Zm00001e010958_P001 No alias component RPL22 of LSU proteome component 0.13 Archaeplastida
Zm00001e035835_P001 No alias component RPL22 of LSU proteome component 0.36 Archaeplastida
Zm00001e038221_P001 No alias component RPL22 of LSU proteome component 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
CC GO:0005761 mitochondrial ribosome IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0007029 endoplasmic reticulum organization IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008175 tRNA methyltransferase activity IEP Neighborhood
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Neighborhood
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002671 Ribosomal_L22e 20 128
No external refs found!