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  5. LOC_Os07g49030.2

LOC_Os07g49030.2


Description : no hits & (original description: none)


Gene families : OG0002613 (Archaeplastida) Phylogenetic Tree(s): OG0002613_tree ,
OG_05_0002797 (LandPlants) Phylogenetic Tree(s): OG_05_0002797_tree ,
OG_06_0002932 (SeedPlants) Phylogenetic Tree(s): OG_06_0002932_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g49030.2
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Cre02.g085701 No alias No description available 0.01 Archaeplastida
GSVIVT01031198001 No alias No description available 0.03 Archaeplastida
Mp1g17880.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c2_37790V3.1 No alias RING/U-box protein 0.02 Archaeplastida
Solyc02g082890.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0005534 galactose binding IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006338 chromatin remodeling IEP Neighborhood
BP GO:0006553 lysine metabolic process IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009085 lysine biosynthetic process IEP Neighborhood
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0043648 dicarboxylic acid metabolic process IEP Neighborhood
BP GO:0046451 diaminopimelate metabolic process IEP Neighborhood
MF GO:0048029 monosaccharide binding IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 462 507
IPR001841 Znf_RING 368 411
No external refs found!