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  5. LOC_Os07g49200.1

LOC_Os07g49200.1


Description : CASP-like protein 4B1 OS=Oryza sativa subsp. japonica (sp|q84nq7|cspl4_orysj : 211.0)


Gene families : OG0002323 (Archaeplastida) Phylogenetic Tree(s): OG0002323_tree ,
OG_05_0001530 (LandPlants) Phylogenetic Tree(s): OG_05_0001530_tree ,
OG_06_0001208 (SeedPlants) Phylogenetic Tree(s): OG_06_0001208_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g49200.1
Cluster HCCA: Cluster_291

Target Alias Description ECC score Gene Family Method Actions
AT2G36330 No alias Uncharacterised protein family (UPF0497) 0.03 Archaeplastida
AT4G11655 No alias Uncharacterised protein family (UPF0497) 0.04 Archaeplastida
AT5G40300 No alias Uncharacterised protein family (UPF0497) 0.03 Archaeplastida
GSVIVT01019832001 No alias CASP-like protein 4A4 OS=Arabidopsis thaliana 0.04 Archaeplastida
MA_882826g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e011777_P001 No alias CASP-like protein 4B3 OS=Oryza sativa subsp. japonica... 0.07 Archaeplastida
Zm00001e031501_P001 No alias CASP-like protein 4B4 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR006702 CASP_dom 50 177
No external refs found!