1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00009p00081210

AMTR_s00009p00081210 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.28

Description : RNA biosynthesis.transcriptional activation.TCP transcription factor


Gene families : OG0000415 (Archaeplastida) Phylogenetic Tree(s): OG0000415_tree ,
OG_05_0000215 (LandPlants) Phylogenetic Tree(s): OG_05_0000215_tree ,
OG_06_0000299 (SeedPlants) Phylogenetic Tree(s): OG_06_0000299_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00081210
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT1G35560 No alias TCP family transcription factor 0.03 Archaeplastida
AT2G45680 No alias TCP family transcription factor 0.02 Archaeplastida
GSVIVT01008023001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.03 Archaeplastida
Solyc03g006800.1.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Solyc04g009180.3.1 No alias transcription factor (TCP). CHE circadian clock repression factor 0.03 Archaeplastida
Solyc09g008030.1.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Zm00001e023066_P001 No alias transcription factor (TCP). CHE circadian clock repression factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005333 Transcription_factor_TCP 23 94
No external refs found!