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  5. LOC_Os08g01890.1

LOC_Os08g01890.1


Description : no description available(sp|q65xs5|bc10_orysj : 169.0)


Gene families : OG0000189 (Archaeplastida) Phylogenetic Tree(s): OG0000189_tree ,
OG_05_0000499 (LandPlants) Phylogenetic Tree(s): OG_05_0000499_tree ,
OG_06_0000285 (SeedPlants) Phylogenetic Tree(s): OG_06_0000285_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g01890.1
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00191120 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT5G16170 No alias Core-2/I-branching... 0.03 Archaeplastida
GSVIVT01010878001 No alias No description available 0.04 Archaeplastida
GSVIVT01011858001 No alias No description available 0.04 Archaeplastida
GSVIVT01031004001 No alias No description available 0.03 Archaeplastida
GSVIVT01035340001 No alias No description available 0.03 Archaeplastida
LOC_Os02g22160.1 No alias no description available(sp|q65xs5|bc10_orysj : 129.0) 0.04 Archaeplastida
Pp3c10_22140V3.1 No alias Core-2/I-branching... 0.02 Archaeplastida
Pp3c24_4540V3.1 No alias Core-2/I-branching... 0.04 Archaeplastida
Pp3c2_20630V3.1 No alias Core-2/I-branching... 0.03 Archaeplastida
Smo65497 No alias No description available 0.03 Archaeplastida
Solyc05g009120.3.1 No alias no description available(sp|q65xs5|bc10_orysj : 165.0) 0.05 Archaeplastida
Solyc07g008940.3.1 No alias no description available(sp|q65xs5|bc10_orysj : 186.0) 0.03 Archaeplastida
Zm00001e020077_P002 No alias no description available(sp|q65xs5|bc10_orysj : 329.0) 0.02 Archaeplastida
Zm00001e024826_P001 No alias no description available(sp|q65xs5|bc10_orysj : 127.0) 0.06 Archaeplastida
Zm00001e029160_P001 No alias no description available(sp|q65xs5|bc10_orysj : 176.0) 0.17 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR003406 Glyco_trans_14 139 366
No external refs found!