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  5. LOC_Os08g02250.1

LOC_Os08g02250.1


Description : no hits & (original description: none)


Gene families : OG0000181 (Archaeplastida) Phylogenetic Tree(s): OG0000181_tree ,
OG_05_0008052 (LandPlants) Phylogenetic Tree(s): OG_05_0008052_tree ,
OG_06_0005013 (SeedPlants) Phylogenetic Tree(s): OG_06_0005013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g02250.1
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00247260 evm_27.TU.AmTr_v1... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.06 Archaeplastida
AMTR_s00109p00027450 evm_27.TU.AmTr_v1... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G01110 IQD18 IQ-domain 18 0.09 Archaeplastida
AT1G17480 IQD7 IQ-domain 7 0.05 Archaeplastida
AT1G72670 iqd8 IQ-domain 8 0.04 Archaeplastida
AT2G26410 Iqd4 IQ-domain 4 0.02 Archaeplastida
AT2G33990 iqd9 IQ-domain 9 0.03 Archaeplastida
AT3G09710 IQD1 IQ-domain 1 0.03 Archaeplastida
AT3G51380 IQD20 IQ-domain 20 0.05 Archaeplastida
AT4G10640 IQD16 IQ-domain 16 0.03 Archaeplastida
AT5G35670 iqd33 IQ-domain 33 0.04 Archaeplastida
GSVIVT01016320001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01019668001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.06 Archaeplastida
GSVIVT01035382001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01038630001 No alias No description available 0.03 Archaeplastida
Gb_20874 No alias microtubule - plasma membrane linkage regulator (IQD13) 0.03 Archaeplastida
Gb_40747 No alias microtubule - plasma membrane linkage regulator (IQD13) 0.03 Archaeplastida
LOC_Os03g04210.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g40850.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_19597g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_6756408g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8080485g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp3g23600.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp7g08970.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c12_25060V3.1 No alias IQ-domain 2 0.05 Archaeplastida
Pp3c19_11650V3.1 No alias IQ-domain 3 0.02 Archaeplastida
Pp3c21_11850V3.1 No alias IQ-domain 3 0.02 Archaeplastida
Pp3c22_12150V3.1 No alias IQ-domain 6 0.03 Archaeplastida
Pp3c26_2929V3.1 No alias IQ-domain 2 0.03 Archaeplastida
Pp3c4_23600V3.1 No alias IQ-domain 2 0.02 Archaeplastida
Pp3c4_3290V3.1 No alias IQ-domain 2 0.03 Archaeplastida
Smo441008 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo447811 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo67789 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc01g009340.4.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc08g062940.4.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc08g083240.3.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc09g007410.3.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc12g014130.2.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e016563_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e021855_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e027583_P001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e029506_P001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e037612_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 127 145
IPR000048 IQ_motif_EF-hand-BS 151 165
IPR025064 DUF4005 403 495
No external refs found!