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  5. LOC_Os08g02360.1

LOC_Os08g02360.1


Description : component MTR3/RRP41L of exosome EXO9 core complex


Gene families : OG0001779 (Archaeplastida) Phylogenetic Tree(s): OG0001779_tree ,
OG_05_0007636 (LandPlants) Phylogenetic Tree(s): OG_05_0007636_tree ,
OG_06_0008399 (SeedPlants) Phylogenetic Tree(s): OG_06_0008399_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g02360.1
Cluster HCCA: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
AT3G61620 RRP41 3'-5'-exoribonuclease family protein 0.03 Archaeplastida
Cpa|evm.model.tig00022080.16 No alias RNA processing.RNA decay.exosome complex.EXO9 core... 0.02 Archaeplastida
MA_7833167g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc01g095480.4.1 No alias component RRP41 of exosome EXO9 core complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0007062 sister chromatid cohesion IEP Neighborhood
BP GO:0007064 mitotic sister chromatid cohesion IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
CC GO:0031390 Ctf18 RFC-like complex IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR001247 ExoRNase_PH_dom1 50 173
IPR015847 ExoRNase_PH_dom2 177 238
No external refs found!