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LOC_Os08g03390.1


Description : Pre-mRNA-splicing factor SLU7 OS=Oryza sativa subsp. japonica (sp|q6zk48|slu7_orysj : 804.0)


Gene families : OG0004562 (Archaeplastida) Phylogenetic Tree(s): OG0004562_tree ,
OG_05_0005673 (LandPlants) Phylogenetic Tree(s): OG_05_0005673_tree ,
OG_06_0006060 (SeedPlants) Phylogenetic Tree(s): OG_06_0006060_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g03390.1
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000217.42 No alias Pre-mRNA-splicing factor SLU7-A OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01027813001 No alias Pre-mRNA-splicing factor SLU7 OS=Oryza sativa subsp. indica 0.03 Archaeplastida
Mp1g12350.1 No alias Pre-mRNA-splicing factor SLU7 OS=Oryza sativa subsp.... 0.05 Archaeplastida
Solyc09g072570.3.1 No alias Pre-mRNA-splicing factor SLU7 OS=Oryza sativa subsp.... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR021715 Slu7 136 405
No external refs found!