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  5. LOC_Os08g03450.1

LOC_Os08g03450.1


Description : component RPL37 of LSU proteome component


Gene families : OG0002317 (Archaeplastida) Phylogenetic Tree(s): OG0002317_tree ,
OG_05_0002166 (LandPlants) Phylogenetic Tree(s): OG_05_0002166_tree ,
OG_06_0002211 (SeedPlants) Phylogenetic Tree(s): OG_06_0002211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g03450.1
Cluster HCCA: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00029660 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
AT1G52300 No alias Zinc-binding ribosomal protein family protein 0.19 Archaeplastida
AT3G16080 No alias Zinc-binding ribosomal protein family protein 0.18 Archaeplastida
Cpa|evm.model.tig00020610.80 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 Archaeplastida
Cre10.g430400 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 Archaeplastida
GSVIVT01017081001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.16 Archaeplastida
GSVIVT01035677001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 Archaeplastida
Gb_29003 No alias component RPL37 of LSU proteome component 0.13 Archaeplastida
Gb_33514 No alias component RPL37 of LSU proteome component 0.08 Archaeplastida
MA_129829g0010 No alias component RPL37 of LSU proteome component 0.05 Archaeplastida
MA_741492g0010 No alias component RPL37 of LSU proteome component 0.03 Archaeplastida
Mp2g12400.1 No alias component RPL37 of LSU proteome component 0.11 Archaeplastida
Pp3c15_4370V3.1 No alias Zinc-binding ribosomal protein family protein 0.05 Archaeplastida
Pp3c18_13160V3.1 No alias Zinc-binding ribosomal protein family protein 0.15 Archaeplastida
Pp3c20_2550V3.1 No alias Zinc-binding ribosomal protein family protein 0.12 Archaeplastida
Pp3c21_9910V3.1 No alias Zinc-binding ribosomal protein family protein 0.1 Archaeplastida
Pp3c23_17260V3.1 No alias Zinc-binding ribosomal protein family protein 0.12 Archaeplastida
Pp3c9_8500V3.1 No alias Zinc-binding ribosomal protein family protein 0.07 Archaeplastida
Solyc03g120780.3.1 No alias component RPL37 of LSU proteome component 0.08 Archaeplastida
Solyc06g066660.4.1 No alias component RPL37 of LSU proteome component 0.12 Archaeplastida
Solyc08g068180.3.1 No alias component RPL37 of LSU proteome component 0.04 Archaeplastida
Zm00001e001908_P001 No alias component RPL37 of LSU proteome component 0.06 Archaeplastida
Zm00001e013434_P001 No alias component RPL37 of LSU proteome component 0.12 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
CC GO:0035145 exon-exon junction complex IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
InterPro domains Description Start Stop
IPR001569 Ribosomal_L37e 3 53
No external refs found!