1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os08g05250.1

LOC_Os08g05250.1


Description : no hits & (original description: none)


Gene families : OG0000001 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0003002 (LandPlants) Phylogenetic Tree(s): OG_05_0003002_tree ,
OG_06_0002016 (SeedPlants) Phylogenetic Tree(s): OG_06_0002016_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g05250.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
ChrSy.fgenesh.mRNA.12 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.04 Archaeplastida
ChrSy.fgenesh.mRNA.22 No alias no hits & (original description: none) 0.04 Archaeplastida
ChrSy.fgenesh.mRNA.57 No alias no hits & (original description: none) 0.03 Archaeplastida
ChrSy.fgenesh.mRNA.62 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
ChrUn.fgenesh.mRNA.11 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
ChrUn.fgenesh.mRNA.5 No alias no hits & (original description: none) 0.06 Archaeplastida
ChrUn.fgenesh.mRNA.52 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
ChrUn.fgenesh.mRNA.53 No alias no hits & (original description: none) 0.07 Archaeplastida
ChrUn.fgenesh.mRNA.88 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
LOC_Os09g02520.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEP Neighborhood
InterPro domains Description Start Stop
IPR000477 RT_dom 1252 1410
IPR005162 Retrotrans_gag_dom 441 515
No external refs found!