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  5. LOC_Os08g05510.1

LOC_Os08g05510.1


Description : transcription factor (MYB-related)


Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0017919 (LandPlants) Phylogenetic Tree(s): OG_05_0017919_tree ,
OG_06_0017480 (SeedPlants) Phylogenetic Tree(s): OG_06_0017480_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g05510.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00022290 evm_27.TU.AmTr_v1... Transcription factor SRM1 OS=Arabidopsis thaliana 0.01 Archaeplastida
AT5G61620 No alias myb-like transcription factor family protein 0.02 Archaeplastida
GSVIVT01020132001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Smo439294 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
Solyc04g008870.3.1 No alias transcription factor (MYB-related) 0.01 Archaeplastida
Zm00001e017388_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e021760_P003 No alias transcription factor (MYB-related) 0.05 Archaeplastida
Zm00001e042486_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0071821 FANCM-MHF complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 107 151
No external refs found!