1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os08g05690.1

LOC_Os08g05690.1


Description : subfamily ABCB transporter


Gene families : OG0000057 (Archaeplastida) Phylogenetic Tree(s): OG0000057_tree ,
OG_05_0012017 (LandPlants) Phylogenetic Tree(s): OG_05_0012017_tree ,
OG_06_0012069 (SeedPlants) Phylogenetic Tree(s): OG_06_0012069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g05690.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00076p00195870 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.01 Archaeplastida
GSVIVT01021365001 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
GSVIVT01033645001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
LOC_Os01g74470.1 No alias subfamily ABCB transporter 0.01 Archaeplastida
Mp2g06270.1 No alias subfamily ABCB transporter 0.01 Archaeplastida
Pp3c17_16450V3.1 No alias ATP binding cassette subfamily B19 0.01 Archaeplastida
Solyc02g087870.3.1 No alias auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 680 940
IPR011527 ABC1_TM_dom 57 330
IPR003439 ABC_transporter-like 397 546
IPR003439 ABC_transporter-like 1012 1161
No external refs found!