Description : DNA topoisomerase (TOP1)
Gene families : OG0003801 (Archaeplastida) Phylogenetic Tree(s): OG0003801_tree ,
OG_05_0003801 (LandPlants) Phylogenetic Tree(s): OG_05_0003801_tree ,
OG_06_0004899 (SeedPlants) Phylogenetic Tree(s): OG_06_0004899_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os08g05840.1 | |
Cluster | HCCA: Cluster_273 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G55300 | MGO1, TOP1, TOP1ALPHA | DNA topoisomerase I alpha | 0.02 | Archaeplastida | |
Mp6g05370.1 | No alias | DNA topoisomerase (TOP1) | 0.02 | Archaeplastida | |
Pp3c13_14620V3.1 | No alias | DNA topoisomerase 1 beta | 0.02 | Archaeplastida | |
Pp3c3_12300V3.1 | No alias | DNA topoisomerase 1 beta | 0.04 | Archaeplastida | |
Smo109207 | No alias | Cell cycle.interphase.DNA replication.preinitiation.TOP1... | 0.03 | Archaeplastida | |
Solyc07g049720.4.1 | No alias | DNA topoisomerase (TOP1) | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003917 | DNA topoisomerase type I activity | IEA | Interproscan |
BP | GO:0006265 | DNA topological change | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEP | Neighborhood |
BP | GO:0006351 | transcription, DNA-templated | IEP | Neighborhood |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Neighborhood |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0010629 | negative regulation of gene expression | IEP | Neighborhood |
BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
BP | GO:0016458 | gene silencing | IEP | Neighborhood |
BP | GO:0031047 | gene silencing by RNA | IEP | Neighborhood |
BP | GO:0048519 | negative regulation of biological process | IEP | Neighborhood |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | Neighborhood |
No external refs found! |