LOC_Os08g06600.1

Description : component NUF2 of NDC80 outer kinetochore complex

Gene families : OG0004734 (Archaeplastida) Phylogenetic Tree(s): OG0004734_tree ,
OG_05_0004703 (LandPlants) Phylogenetic Tree(s): OG_05_0004703_tree ,
OG_06_0004003 (SeedPlants) Phylogenetic Tree(s): OG_06_0004003_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os08g06600.1
Cluster	HCCA: Cluster_203

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00154p00016840	evm_27.TU.AmTr_v1...	Cell cycle.mitosis and meiosis.chromosome...	0.05	Archaeplastida
Cpa\|evm.model.tig00000704.65	No alias	Cell cycle.mitosis and meiosis.chromosome...	0.02	Archaeplastida
Zm00001e006361_P001	No alias	component NUF2 of NDC80 outer kinetochore complex	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0000776	kinetochore	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0031262	Ndc80 complex	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044427	chromosomal part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003743	translation initiation factor activity	IEP	Neighborhood
MF	GO:0008135	translation factor activity, RNA binding	IEP	Neighborhood
BP	GO:0022607	cellular component assembly	IEP	Neighborhood
CC	GO:0032993	protein-DNA complex	IEP	Neighborhood
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Neighborhood
BP	GO:0043933	protein-containing complex subunit organization	IEP	Neighborhood
CC	GO:0044815	DNA packaging complex	IEP	Neighborhood
BP	GO:0051382	kinetochore assembly	IEP	Neighborhood
BP	GO:0051383	kinetochore organization	IEP	Neighborhood
BP	GO:0065003	protein-containing complex assembly	IEP	Neighborhood
BP	GO:0070925	organelle assembly	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005549	Kinetochore_Nuf2	5	147

External Links

No external refs found!