1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os08g08210.1

LOC_Os08g08210.1


Description : class III/Trithorax histone methyltransferase component of histone lysine methylation/demethylation


Gene families : OG0003953 (Archaeplastida) Phylogenetic Tree(s): OG0003953_tree ,
OG_05_0004003 (LandPlants) Phylogenetic Tree(s): OG_05_0004003_tree ,
OG_06_0005410 (SeedPlants) Phylogenetic Tree(s): OG_06_0005410_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g08210.1
Cluster HCCA: Cluster_219

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00043p00149000 evm_27.TU.AmTr_v1... Chromatin organisation.histone modifications.histone... 0.06 Archaeplastida
AT4G15180 SDG2, ATXR3 SET domain protein 2 0.07 Archaeplastida
Cre17.g742700 No alias Chromatin organisation.histone modifications.histone... 0.02 Archaeplastida
GSVIVT01030649001 No alias Chromatin organisation.histone modifications.histone... 0.13 Archaeplastida
MA_102811g0010 No alias class III/Trithorax histone methyltransferase component... 0.1 Archaeplastida
MA_102811g0020 No alias class III/Trithorax histone methyltransferase component... 0.05 Archaeplastida
Mp2g06500.1 No alias class III/Trithorax histone methyltransferase component... 0.12 Archaeplastida
Pp3c11_18840V3.1 No alias SET domain protein 2 0.07 Archaeplastida
Pp3c7_5920V3.1 No alias SET domain protein 2 0.04 Archaeplastida
Smo432361 No alias Chromatin organisation.histone modifications.histone... 0.04 Archaeplastida
Smo447947 No alias Chromatin organisation.histone modifications.histone... 0.09 Archaeplastida
Solyc07g052940.4.1 No alias class III/Trithorax histone methyltransferase component... 0.12 Archaeplastida
Zm00001e021659_P001 No alias class III/Trithorax histone methyltransferase component... 0.2 Archaeplastida
Zm00001e039942_P003 No alias class III/Trithorax histone methyltransferase component... 0.19 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002790 peptide secretion IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0009306 protein secretion IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010921 regulation of phosphatase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0019902 phosphatase binding IEP Neighborhood
MF GO:0019903 protein phosphatase binding IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0035303 regulation of dephosphorylation IEP Neighborhood
BP GO:0035304 regulation of protein dephosphorylation IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051336 regulation of hydrolase activity IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001214 SET_dom 442 510
No external refs found!