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  5. LOC_Os08g09410.1

LOC_Os08g09410.1


Description : Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana (sp|q9s9v9|fbl23_arath : 105.0)


Gene families : OG0000331 (Archaeplastida) Phylogenetic Tree(s): OG0000331_tree ,
OG_05_0000701 (LandPlants) Phylogenetic Tree(s): OG_05_0000701_tree ,
OG_06_0003961 (SeedPlants) Phylogenetic Tree(s): OG_06_0003961_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g09410.1

Target Alias Description ECC score Gene Family Method Actions
AT4G03625 No alias No description available 0.05 Archaeplastida
AT4G03630 No alias RNI-like superfamily protein 0.05 Archaeplastida
LOC_Os08g09220.1 No alias Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.06 Archaeplastida
LOC_Os08g09460.1 No alias Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os08g09600.1 No alias Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os08g09650.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc07g005750.3.1 No alias component F-box of SCF E3 ubiquitin ligase complex 0.03 Archaeplastida
Zm00001e037423_P003 No alias Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e037424_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 16 61
No external refs found!