LOC_Os08g09480.1


Description : Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana (sp|q9s9v9|fbl23_arath : 94.7)


Gene families : OG0000331 (Archaeplastida) Phylogenetic Tree(s): OG0000331_tree ,
OG_05_0000701 (LandPlants) Phylogenetic Tree(s): OG_05_0000701_tree ,
OG_06_0003961 (SeedPlants) Phylogenetic Tree(s): OG_06_0003961_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g09480.1
Cluster HCCA: Cluster_239

Target Alias Description ECC score Gene Family Method Actions
AT4G03625 No alias No description available 0.05 Archaeplastida
AT4G03630 No alias RNI-like superfamily protein 0.04 Archaeplastida
LOC_Os08g09470.1 No alias Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.01 Archaeplastida
Mp4g03420.1 No alias component FBX of SCF E3 ubiquitin ligase complex 0.01 Archaeplastida
Zm00001e037423_P003 No alias Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.06 Archaeplastida
Zm00001e037424_P001 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006333 chromatin assembly or disassembly IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009452 7-methylguanosine RNA capping IEP Neighborhood
BP GO:0009611 response to wounding IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0036260 RNA capping IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!