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  5. LOC_Os08g09600.1

LOC_Os08g09600.1


Description : Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana (sp|q9s9v9|fbl23_arath : 89.4)


Gene families : OG0000331 (Archaeplastida) Phylogenetic Tree(s): OG0000331_tree ,
OG_05_0000701 (LandPlants) Phylogenetic Tree(s): OG_05_0000701_tree ,
OG_06_0003961 (SeedPlants) Phylogenetic Tree(s): OG_06_0003961_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g09600.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AT4G03625 No alias No description available 0.05 Archaeplastida
AT4G03630 No alias RNI-like superfamily protein 0.03 Archaeplastida
LOC_Os08g09380.1 No alias Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os08g09410.1 No alias Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os08g09470.1 No alias Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.01 Archaeplastida
LOC_Os08g09590.1 No alias Putative F-box/LRR-repeat protein 9 OS=Arabidopsis... 0.03 Archaeplastida
MA_30078g0010 No alias component F-box of SCF E3 ubiquitin ligase complex 0.02 Archaeplastida
Zm00001e037423_P003 No alias Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e037424_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0009452 7-methylguanosine RNA capping IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0036260 RNA capping IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!