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  5. LOC_Os08g09650.1

LOC_Os08g09650.1


Description : no hits & (original description: none)


Gene families : OG0000331 (Archaeplastida) Phylogenetic Tree(s): OG0000331_tree ,
OG_05_0000701 (LandPlants) Phylogenetic Tree(s): OG_05_0000701_tree ,
OG_06_0000556 (SeedPlants) Phylogenetic Tree(s): OG_06_0000556_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g09650.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AT4G03625 No alias No description available 0.04 Archaeplastida
AT4G03630 No alias RNI-like superfamily protein 0.03 Archaeplastida
LOC_Os02g21260.1 No alias Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os08g09380.1 No alias Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os08g09410.1 No alias Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os08g09470.1 No alias Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.01 Archaeplastida
Zm00001e037423_P003 No alias Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e037424_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006595 polyamine metabolic process IEP Neighborhood
BP GO:0006596 polyamine biosynthetic process IEP Neighborhood
BP GO:0006597 spermine biosynthetic process IEP Neighborhood
BP GO:0008215 spermine metabolic process IEP Neighborhood
BP GO:0008216 spermidine metabolic process IEP Neighborhood
BP GO:0008295 spermidine biosynthetic process IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0009309 amine biosynthetic process IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
BP GO:0097164 ammonium ion metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 39 86
No external refs found!