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  5. LOC_Os08g12280.1

LOC_Os08g12280.1


Description : no hits & (original description: none)


Gene families : OG0000018 (Archaeplastida) Phylogenetic Tree(s): OG0000018_tree ,
OG_05_0000007 (LandPlants) Phylogenetic Tree(s): OG_05_0000007_tree ,
OG_06_0000001 (SeedPlants) Phylogenetic Tree(s): OG_06_0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g12280.1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
ChrUn.fgenesh.mRNA.16 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os01g03590.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g07820.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os01g18260.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g19590.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g19960.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os01g20190.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os01g21490.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g24530.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os01g29710.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g33630.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g36766.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g38810.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g46330.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g71910.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os01g74210.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g01420.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os02g08280.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os02g16590.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g24300.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g24310.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g25370.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os02g25520.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os02g25560.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os02g49290.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g51230.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os03g27520.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os03g27860.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g30080.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os03g31910.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g43280.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g54020.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os04g07930.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g10020.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g12390.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g19000.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g20450.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os04g22840.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os04g23250.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g23280.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g28650.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os04g29900.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g34820.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g34850.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g40240.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g43590.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os05g03950.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os05g10230.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g16580.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g18570.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g18990.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g19700.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g26100.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g27034.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g27860.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g39460.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g50880.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os06g10380.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os06g15050.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g15340.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g15850.1 No alias Ethylene receptor 4 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os06g16540.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os06g16900.1 No alias no hits & (original description: none) 0.11 Archaeplastida
LOC_Os06g21000.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g21150.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os06g33030.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os06g35350.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os06g42580.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g09540.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os07g15800.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os07g17510.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os07g30750.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g31900.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g32750.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os07g34200.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os07g46120.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os08g03730.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os08g04870.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g08950.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os08g13300.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os08g17120.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os08g24590.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g26280.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os08g27180.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g34590.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g09150.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g11060.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os09g13560.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os09g13900.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g14260.1 No alias Glutathione S-transferase T3 OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os09g15610.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g16890.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os09g17290.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os09g20130.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os09g20160.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g20450.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g25240.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os09g25360.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g37220.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g07554.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os10g07562.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os10g08360.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g08650.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os10g16800.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os10g29010.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g03950.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os11g14350.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os11g17410.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os11g19550.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os11g24870.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g31180.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g35762.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os11g40960.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g44100.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os12g01640.1 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os12g01870.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g05240.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g11600.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os12g13080.1 No alias no hits & (original description: none) 0.13 Archaeplastida
LOC_Os12g14200.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os12g14820.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g16400.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g23240.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os12g24680.1 No alias no hits & (original description: none) 0.12 Archaeplastida
LOC_Os12g25300.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os12g26070.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os12g28740.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g33060.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.08 Archaeplastida
LOC_Os12g36480.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os12g36990.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g37240.1 No alias no hits & (original description: none) 0.16 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!