LOC_Os08g13840.2

Description : transcription factor (WRKY)

Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000087 (LandPlants) Phylogenetic Tree(s): OG_05_0000087_tree ,
OG_06_0000067 (SeedPlants) Phylogenetic Tree(s): OG_06_0000067_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os08g13840.2
Cluster	HCCA: Cluster_229

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00243090	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AMTR_s00013p00160270	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AMTR_s00053p00025460	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
AT2G38470	WRKY33, ATWRKY33	WRKY DNA-binding protein 33	0.03	Archaeplastida
AT2G46400	WRKY46, ATWRKY46	WRKY DNA-binding protein 46	0.03	Archaeplastida
AT4G01250	WRKY22, AtWRKY22	WRKY family transcription factor	0.03	Archaeplastida
GSVIVT01012196001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
Gb_01527	No alias	transcription factor (WRKY)	0.05	Archaeplastida
Gb_05176	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Gb_09073	No alias	no hits & (original description: none)	0.02	Archaeplastida
Gb_23334	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Gb_41027	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os01g09100.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os01g54600.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os09g16510.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
MA_101135g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_10425932g0020	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_10429098g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_10432362g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_10436051g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_125146g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_212937g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_2290g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_310991g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_426605g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_47307g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_53351g0010	No alias	transcription factor (WRKY)	0.01	Archaeplastida
MA_558583g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_6918834g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
Mp1g08960.1	No alias	transcription factor (WRKY)	0.01	Archaeplastida
Mp4g00200.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Mp6g16800.1	No alias	transcription factor (WRKY)	0.01	Archaeplastida
Mp7g06550.1	No alias	transcription factor (WRKY)	0.01	Archaeplastida
Pp3c1_40230V3.1	No alias	WRKY DNA-binding protein 11	0.03	Archaeplastida
Smo77979	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.01	Archaeplastida
Solyc01g095100.4.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc02g071130.4.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc05g015850.4.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc12g056750.3.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e004183_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e007023_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e014245_P001	No alias	transcription factor (WRKY)	0.05	Archaeplastida
Zm00001e016623_P001	No alias	transcription factor (WRKY)	0.05	Archaeplastida
Zm00001e022331_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e025937_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e027460_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e027911_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e030443_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e032260_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e037631_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Neighborhood
BP	GO:0016043	cellular component organization	IEP	Neighborhood
BP	GO:0016567	protein ubiquitination	IEP	Neighborhood
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Neighborhood
MF	GO:0030599	pectinesterase activity	IEP	Neighborhood
BP	GO:0032446	protein modification by small protein conjugation	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
BP	GO:0045229	external encapsulating structure organization	IEP	Neighborhood
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Neighborhood
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR018872	Zn-cluster-dom	193	239
IPR003657	WRKY_dom	243	299

External Links

No external refs found!

LOC_Os08g13840.2

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation