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  5. LOC_Os08g14230.1

LOC_Os08g14230.1


Description : villin actin-crosslinking factor


Gene families : OG0000669 (Archaeplastida) Phylogenetic Tree(s): OG0000669_tree ,
OG_05_0000929 (LandPlants) Phylogenetic Tree(s): OG_05_0000929_tree ,
OG_06_0002995 (SeedPlants) Phylogenetic Tree(s): OG_06_0002995_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g14230.1
Cluster HCCA: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00248490 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin... 0.02 Archaeplastida
AMTR_s00029p00238270 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin... 0.04 Archaeplastida
GSVIVT01033261001 No alias Cytoskeleton.microfilament network.actin... 0.02 Archaeplastida
Gb_23115 No alias villin actin-crosslinking factor 0.05 Archaeplastida
Gb_29107 No alias villin actin-crosslinking factor 0.04 Archaeplastida
LOC_Os06g44890.1 No alias villin actin-crosslinking factor 0.04 Archaeplastida
MA_10429481g0030 No alias villin actin-crosslinking factor 0.04 Archaeplastida
MA_10430359g0040 No alias villin actin-crosslinking factor 0.06 Archaeplastida
MA_61502g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8786484g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g24640.1 No alias villin actin-crosslinking factor 0.02 Archaeplastida
Pp3c18_7160V3.1 No alias villin 4 0.03 Archaeplastida
Smo177604 No alias Cytoskeleton.microfilament network.actin... 0.04 Archaeplastida
Zm00001e001712_P002 No alias villin actin-crosslinking factor 0.02 Archaeplastida
Zm00001e028314_P001 No alias villin actin-crosslinking factor 0.04 Archaeplastida
Zm00001e038175_P001 No alias villin actin-crosslinking factor 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0007030 Golgi organization IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
BP GO:0030832 regulation of actin filament length IEP Neighborhood
BP GO:0030833 regulation of actin filament polymerization IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0032271 regulation of protein polymerization IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0032956 regulation of actin cytoskeleton organization IEP Neighborhood
BP GO:0032970 regulation of actin filament-based process IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0043254 regulation of protein complex assembly IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0048365 Rac GTPase binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051493 regulation of cytoskeleton organization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0110053 regulation of actin filament organization IEP Neighborhood
BP GO:1902903 regulation of supramolecular fiber organization IEP Neighborhood
InterPro domains Description Start Stop
IPR007123 Gelsolin-like_dom 274 339
IPR007123 Gelsolin-like_dom 152 218
IPR007123 Gelsolin-like_dom 28 111
No external refs found!