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  5. LOC_Os08g14400.1

LOC_Os08g14400.1


Description : transcription factor (WOX)


Gene families : OG0000425 (Archaeplastida) Phylogenetic Tree(s): OG0000425_tree ,
OG_05_0000212 (LandPlants) Phylogenetic Tree(s): OG_05_0000212_tree ,
OG_06_0001039 (SeedPlants) Phylogenetic Tree(s): OG_06_0001039_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g14400.1
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00122680 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
AMTR_s00405p00009920 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AT3G18010 WOX1 WUSCHEL related homeobox 1 0.04 Archaeplastida
GSVIVT01009453001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
Gb_01484 No alias transcription factor (WOX) 0.03 Archaeplastida
Gb_07187 No alias transcription factor (WOX) 0.03 Archaeplastida
Gb_12294 No alias transcription factor (WOX) 0.03 Archaeplastida
Gb_12565 No alias transcription factor (WOX) 0.03 Archaeplastida
MA_1910g0010 No alias transcription factor (WOX) 0.03 Archaeplastida
MA_8832398g0010 No alias transcription factor (WOX) 0.02 Archaeplastida
Solyc04g078650.4.1 No alias transcription factor (WOX) 0.02 Archaeplastida
Solyc06g075567.1.1 No alias transcription factor (WOX) 0.06 Archaeplastida
Solyc11g072770.2.1 No alias transcription factor (WOX) 0.05 Archaeplastida
Solyc11g072790.2.1 No alias transcription factor (WOX) 0.04 Archaeplastida
Zm00001e001527_P001 No alias transcription factor (WOX) 0.02 Archaeplastida
Zm00001e028720_P001 No alias transcription factor (WOX) 0.07 Archaeplastida
Zm00001e029534_P001 No alias transcription factor (WOX) 0.02 Archaeplastida
Zm00001e032433_P003 No alias transcription factor (WOX) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 41 101
No external refs found!